• Andy Turner's Blog 2010-05 Web Page

  • [An image of Andy Turner]

  • Blog

  • Events:
    • European Geosciences Union General Assembly 2010
      • http://meetings.copernicus.org/egu2010
      • 2010-05-02 to 2010-05-07, Vienna, Austria.
    • eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
      • http://www.nesc.ac.uk/esi/events/1078/
      • 2010-05-11 to 2010-05-12, Edinburgh, UK.
    • ...
    • Events planning to attend/attended
      • eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
        • http://www.nesc.ac.uk/esi/events/1078/
        • 2010-05-11 to 2010-05-12, Edinburgh, UK.
      • ...
    • Events on the horizon:
      • International Congress on Computer Applications and Computational Science (CACS 2010)
        • http://irast.org/conferences/CACS/2010
        • 2010-12-04 to 2010-12-06, Singapore.
      • The 11th IEEE/ACM International Conference on Grid Computing (Grid2010)
        • http://www.grid2010.org/
        • 2010-10-24 to 2010-10-29, Brussels, Belgium.
        • Co-located with Open Grid Forum (OGF30)
      • Sixth International Conference on Geographic Information Science (GIScience 2010)
        • http://www.giscience2010.org
        • 2010-09-14 to 2010-09-17, Zurich, Switzerland.
      • 3rd World Congress on Social Simulation (WCSS 2010)
        • http://www.wcss2010.org
        • 2010-09-06 to 2010-09-09, Kassel, Germany.
      • FOSS4G 2010
        • http://2010.foss4g.org
        • 2010-09-06 to 2010-09-09, Barcelona, Spain.
      • JISC Inovation Forum 2010
        • http://events.jiscinvolve.org/jif10
        • http://jif10.uservoice.com/pages/32842-general
        • 2010-07-28 to 2010-07-29 London, UK.
      • GeoWeb 2010
        • http://www.geowebconference.org
        • 2010-07-26 to 2010-07-30, Vancouver, Canada.
      • Second Open Source GIS UK Conference - OSGIS 2010
        • http://cgs.nottingham.ac.uk/~osgis10/os_home.html
        • 2010-06-20 to 2010-06-21, Nottingham, UK.
      • Future Research Directions in Agent Based Modelling
        • http://tyne.dl.ac.uk/twiki/bin/view/GridAndHPC/LeedsABMWorkshop
        • 2010-06-15, Leeds, UK.
      • 36th Annual Conference of the International Association for Social Science Information Service and Technology (IASSIST 2010)
        • http://ciser.cornell.edu/IASSIST/
        • 2010-06-01 to 2010-06-04, New York, USA.
  • 2010-06-07

  • 2010-05-28

    • e-Science
      • GENESIS
        • Code development
          • ...
  • 2010-05-27

    • Browsing
      • http://www.scientificamerican.com/article.cfm?id=profile-of-martin-gardner
    • e-Science
      • GENESIS
        • Code development
          • ...
  • 2010-05-26

    • Browsing
      • http://www.surveymapper.com/
      • http://blog.fortiusone.com/2010/05/25/gis-in-the-cloud/
    • Miscellanea
      • Helping Maria (username maza) with Java
        • Getting started with Netbeans to develop code
        • Debugging in Netbeans
        • Explanation of rendering and on screen and off screen images
        • Packaging
        • Refactoring
        • Code formatting
      • SRDS Preparation
        • Reflect on acheivements, delivery to objectives and training needs...
    • e-Science
      • GENESIS
        • Code development
          • Consider optimisation by passing in boolean to control when to check to ensuring there is enough memory to continue into memory handling methods
          • Memory Handling
  • 2010-05-25

    • e-Science
      • GENESIS
        • Code development
          • Memory Handling
  • 2010-05-24

    • Browsing
      • http://code.google.com/p/spatialcache/
      • http://groups.google.com/group/developer-contact
      • http://live.psu.edu/story/46059
      • http://www.greenpeace.org.uk/blog/climate/airplot-competition-we-have-winner-20100513
    • Miscellanea
      • Tidy subversion repository and release latest versions of source code
        • ...
    • e-Science
      • GENESIS
        • Code development
          • Memory Handling
  • 2010-05-14

    • Browsing
      • http://twitter.com/#search?q=%23futr
      • http://twitter.com/#search?q=%23okscotland
      • http://www.ustream.tv/channel/open-knowledge-scotland#utm_campaign=twitter.com&utm_source=4155993&utm_medium=social
    • Teaching
      • GEOG3600 Dissertation Support mentoring
        • ...
    • e-Science
      • e-ISS
        • Developer chat meeting
          • ...
      • GENESIS
        • Memory Handling Refactor of Grids
          • Grids memory handling to be changed so that:
            • rather than simply holding a reference to all other Grids, each Grid holds a reference to a Grid_Environment which allows OutOfMemory Errors to be thrown out to be collected by another handler which might perform swapping operations of a different set of data...
  • 2010-05-13

    • Browsing
      • http://limesurvey.oii.ox.ac.uk/index.php?sid=28672
      • http://blog.klokan.cz/2010/05/foss4g-2010-vote-for-oldmapsonlineorg.html
      • https://addons.mozilla.org/en-US/firefox/search?q=MementoFox&cat=all
    • Miscellanea
      • Emailed student project idea to Andy Evans and David Bell
        • ...
      • Preparation for SRDS review meeting
        • ...
    • e-Science
      • GENESIS
        • Memory Handling Refactor of Grids
          • Grids memory handling to be changed so that:
            • rather than simply holding a reference to all other Grids, each Grid holds a reference to a Grid_Environment which allows OutOfMemory Errors to be thrown out to be collected by another handler which might perform swapping operations of a different set of data...
  • 2010-05-12

    • Browsing
      • http://seasr.org/
      • http://seasr.org/meandre/
      • http://seasr.org/blog/2009/11/03/meandre-1-4-7-released/
      • http://redress.lancs.ac.uk/
      • http://www.nesc.ac.uk/esi/events/968/abstracts.cfm
      • http://ajah.ca/blog/2010/05/finding-allies-in-the-academy/
      • http://okscotland.eventbrite.com/
      • http://blog.okfn.org/2010/04/08/open-knowledge-scotland-may-13th-3-7pm-edinburgh/
      • http://www.jisc.ac.uk/Home/news/stories/2010/04/podcast104hepi.aspx
      • http://www.jisc.ac.uk/Home/events/2010/06/surviveorthrive.aspx
      • http://www.jisc.ac.uk/events/2010/04/jisc10/programme/researchimpact.aspx
      • http://www.jisc.ac.uk/events/2010/04/jisc10/virtualgoodybag.aspx
      • http://www.jisc.ac.uk/Home/news/stories/2010/04/inform.aspx
      • http://nationalgridservice.blogspot.com/2010/05/behind-scenes-at-ngs-web-site.html
      • http://en.wikipedia.org/wiki/UniWar
      • http://www.guardian.co.uk/science/2010/apr/10/polite-request-for-scientific-data
      • http://blog.paulwalk.net/2010/04/26/draft-or10-challenge-idea/
      • http://www.rufuspollock.org/about/
      • http://events.linkeddata.org/ldow2010/papers/ldow2010_paper04.pdf
    • e-Science
      • eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
        • http://www.nesc.ac.uk/esi/events/1078/
        • 2010-05-11 to 2010-05-12, Edinburgh, UK.
        • Andy Turner's NCeSS Sakai Portal : My Workspace Worksite : Wiki : Research3 2010-05 Page
  • 2010-05-11

    • e-Science
      • eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
        • http://www.nesc.ac.uk/esi/events/1078/
        • 2010-05-11 to 2010-05-12, Edinburgh, UK.
        • Andy Turner's NCeSS Sakai Portal : My Workspace Worksite : Wiki : Research3 2010-05 Page
  • 2010-05-10

    • Browsing
      • http://code.google.com/apis/opensocial/
    • e-Science
      • Preparation for eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
        • http://www.nesc.ac.uk/esi/events/1078/
        • 2010-05-11 to 2010-05-12, Edinburgh, UK.
        • Andy Turner's NCeSS Sakai Portal : My Workspace Worksite : Wiki : Research3 2010-05 Page
        • Presentation Draft
          • GENESIS Web 2.0 Agent City Simulation: Getting users and allowing them to control/guide Agents and model development
            • Outline
              • Introduction
              • GENESIS Modelling
              • Specifying Agents in GENESIS
              • User control of Agents in GENESIS
              • Web 2.0
                • Encouraging users and moving towards open development
              • Issues and Feedback
            • Introduction
              • Andy Turner
                • http://www.geog.leeds.ac.uk/people/a.turner
                • Research scientist based at the University of Leeds specialising in e-Science and Computational Geography
                • Blogging what work I do as I do it
                  • http://www.geog.leeds.ac.uk/people/a.turner/personal/blog/
              • SIM-UK
                • Origins in March 2005
                • Andy Turner's SIM-UK Web Page
                • Andy Turner's SIM-UK Project Web Page
              • GENESIS
                • http://www.geog.leeds.ac.uk/people/a.turner/projects/GENESIS/
                • Generative e-Social Science for Socio-Spatial Simulation
                • A second phase research node of the UK National Centre for e-Social Science funded by ESRC
                • http://www.genesis.ucl.ac.uk/
                • Development of Social Simulation models
              • NeISS
                • http://www.geog.leeds.ac.uk/people/a.turner/projects/e-ISS/
                • National e-Infrastructure for Social Simulation
                • JISC Information Environment Programme 2009-11 project
                • http://www.neiss.org.uk
                • To build a generic production quality social simulation e-Infrastructure covering the social simulation lifecycle
                • Provision of e-Infrastructure that can allow others to develop and use Social Simulation models
              • Geographic Agent Based Modelling
                • Geographic
                  • About interaction on or near the surface of earth
                  • Space-time-attribute
                  • It is about people and their environment
                • Agent Based Modelling
                  • Distinguishes an Environment and Agents that operate within it
                  • Environment
                    • Provides the overall spatial and temporal extent and detail
                    • Has distributed attributes which are seeded and then developed as a result of agent interaction
                  • Agents
                    • Individual entities that may interact both with other agents and with the Environment
                • Individual Human Agents
                  • Digital demographic representation of a person
                  • Universal characteristics
                    • Date of birth
                    • Location
                    • Memory
                    • Current activity
                    • Scheduled activites
                    • Default behaviours
                  • Example additional characteristic
                    • Residential locations
                    • Preferences
                    • ...
            • GENESIS modelling
              • 2 Models
                1. Demographic/Migration model
                  • Daily time step
                  • Birth
                  • Death
                  • Migration type person movements
                2. Traffic/Transportation model
                  • Second time step
                  • Initial focus on travel to work
                    • Incorporate travel to school...
                    • Incorporate travel to do other things...
              • Major issues
                • Constraining movement
                • Data handling
                  • Large amounts of data generated and used in the models
                    • Need for bespoke swapping of data between persistent memory and faster access memory for computation?
                    • Vector
                    • Raster
                    • Agent
            • Specifying Agents in GENESIS
              • Crux: Basic idea
                • To get a model running based on available data as an initial estimate of people movements
                  • Allow users to specify their own movements in the models and modify and detail the movements in the simulation to reflect what people say they do/did
              • Initial seeding the Traffic/Transport model
                • 2001 UK Census data for commuting
                • PLASC
                • Other survey data and transportation models that suggest levels of movement
            • User control of Agents in GENESIS
              • Issues and concerns
                • What interface?
                • Security and trust
                • How to plug in?
                • This is what I want the feedback to focus on...
            • Web 2.0
              • Encouraging users and moving towards open development
                • What to give the users back?
                  • Why should users want the application?
                    • What does it give them?
                • Sustainable development
                  • Moving towards open development
                • Need for quality and agile/responsive development
            • Issues and Feedback
              • Where to start with the Web 2.0 work?
              • Develop and release an Open Social Application?
                • http://code.google.com/apis/opensocial/
                • Need for a release strategy?
                • Target users of popular social networking tools and travel management tools
                  • Twitter
                    • http://twitter.com/
                  • Facebook
                    • http://www.facebook.com/
                  • Tripit
                    • http://www.tripit.com/
                  • ...
              • Any questions/comments?
      • GENESIS
        • Tidying SVN repository
          • ...
  • 2010-05-07

    • e-Science
      • Preparation for eSI Workshop: The Influence and Impact of Web 2.0 on Various Applications
        • http://www.nesc.ac.uk/esi/events/1078/
        • 2010-05-11 to 2010-05-12, Edinburgh, UK.
        • Andy Turner's NCeSS Sakai Portal : My Workspace Worksite : Wiki : Research3 2010-05 Page
      • GENESIS
        • Refactoring Memory Handling
          • ...
  • 2010-05-06

    • e-Science
      • e-ISS
        • Computer Purchasing Meeting
          • Jason Lander, Nick Malleson, Mark Birkin, Andy Turner
          • ...
      • GENESIS
        • Refactoring Memory Handling
          • ...
  • 2010-05-05

    • Teaching
      • GEOG2300/GEOG3600 Final group meeting of the academic year
        • http://www.geog.leeds.ac.uk/people/a.turner/teaching/geog3600/2010to2011/
    • e-Science
      • GENESIS
        • Refactoring Memory Handling
          • ...
  • 2010-05-04

    • Browsing
      • http://38degrees.org.uk/
    • Miscellanea
      • Prepared and delivered 20 minute presentation to CSAP
        • A short presentation on research collaboration
          • Andy Turner
        • Outline
          • Introduction
          • Research interests
          • Research methodology
          • Teaching/mentoring
          • Funded research
          • Other on-going research collaborations
          • Call for collaboration
        • Introduction
          • Aims of this presentation and this presentation material
            • To encourage research collaboration
            • To communicate, inform and entertain
            • Help me prepare for my upcoming Staff Review and Development Scheme (SRDS) review meetings
          • Who am I?
            • I Am a strange loop
              • http://en.wikipedia.org/wiki/I_Am_a_Strange_Loop
            • A research scientist
              • Specialising in computational geography
              • Conducting research following an open and collaborative approach
            • You can find out more about the research I am doing
              • On my School of Geography Web Pages
                • http://www.geog.leeds.ac.uk/people/a.turner
                • I write a blog about my work activity that I update as I do things
                  • http://www.geog.leeds.ac.uk/people/a.turner/personal/blog/
                  • Organised into monthly pages with daily entries
                  • More organised now than when I started in 2006
                • General section headings
                  • Browsing
                    • Selected URLs
                  • eResearch
                    • For projects and collaborative research
                  • Teaching
                  • Miscellaneous
                • It is not user interactive
                  • Others cannot comment on it/contribute to it directly
                    • Easy to manage
                    • Misses out on Web 2.0 benefits
                • It is useful
                  • I aim to make it more useful
                  • I aim to distill more from it to enhance my web pages
                • It is an increasingly interesting record
              • By sending me a message
                • Email
                  • A.G.D.Turner@leeds.ac.uk
                • Identi.ca
                  • http://identi.ca/agdturner/
                • Twitter
                  • http://twitter.com/agdturner
        • Research interests
          • I have to limit this to things I am currently doing
            • I can be interested in researching most things!
          • Computational Geography
            • The application of the computational science paradigm to problems in geography
              • Focus on the development and application of methods and open source implementation
            • Geographically weighted statistics
          • Raster and vector spatial data handling
          • Pattern recognition
            • Application of digital neural networks
          • Modelling
            • Everything
              • Focus on the development and application of a digital social simulation model of the world
                • Representing every individual person
          • Computaional challenges
            • Increasing
              • Scale
              • Precision
              • Detail
          • Uncertainty
          • Road safety
            • Analysis of road accident incidence
          • Geomorphometrics
            • Generalising and analysing the shape and dynamics of geographical measurements
            • Given measures of a surface geometry
              • Where are the places of interest?
              • What are the features?
              • Given contextual information
                • e.g. This is a formerly glaciated area of land and is now near a coast
                • e.g. This is a town
                • What features are likely to be present?
          • Organisation and data management
            • Curation
            • Preservation
            • Managing research and research information
              • Strategies to cope with communication
              • Virtual research environments
        • Research methodology
          • The study of research methods
          • An open and collaborative approach is not the only approach to research
            • With the advent of the Internet and the World Wide Web it has become far easier to do this
            • It contrasts with research undertaken in secret
          • My open approach attempts to outline what I am planning to do before I do it and as I do it
            • Announcing what I intend to do before I do it means that
              • The intent can be compared with what took place
              • Others can find out I am working which is a first step to collaboration
          • I look for others working on a similar things
            • Try to communicate and liaise and consider how to collaborate
            • Others work can provide
              • The opportunity to learn hard things the easy way
                • e.g. Reasoning on why an algorithm works or fails and conditions and limits of application
              • Something useful that saves a job
                • algorithm
                • software
                • data
          • Re-inventing the wheel can be good
            • We do a lot of it around here!
            • There are always better wheels that can be made!
            • Learning by doing is good exercise
              • Lessons learned this way and tools developed can be more easily re-applied in other relevant contexts
            • Practice at doing helps especially when it seems there is no other way, but to develop a solution on your own
          • Going it alone does not scale
            • Some collaboration is needed as we address the unknown big questions that drive science
            • Who are we?
            • What are all these things around us?
            • How did we get here?
            • What were things like before?
            • What will things be like in the future?
          • Attempting to focus on impactful research
            • Impact seems especially important for funding
            • I want to make a contribution to the greater good of future society
            • It is difficult to measure impact!
          • Reading and reviewing is as important as writing
            • A balance in this is key like a balnce between teaching and research
            • These things feed each other
          • I log my attendance at events
            • On my blog
            • By suggesting/submitting items to the editor of the School of Geography Newsletter
            • Using Identi.ca and Twitter microblogging services
          • I also use the http://identi.ca/ and http://twitter.com/ microblogging services to check for details and occasionally comment interactively about events
            • There has been significant use of such microblogging services at events I have attended in the last year or so
              • I think this trend will continue as it helps participants to get involved and organise events interactively
                • Reading and making comments with this medium helps to develop a collective consciousness
                • It helps ask/answer questions
                • It helps filter expert opinion
        • Teaching/Mentoring/Helping
          • First year tutoring
            • I performed the role for the first time in the first semester of this academic year 2009/2010
              • It was enlightening and a better experience than I expected
                • I was blessed with good and academically astute students that made friends and worked well
                  • I think about them from time to time and wonder if I will work with them again...
            • I look forward to doing this again
          • Undergraduate dissertation mentoring
            • I am performing this role for the first time and started in summer 2010)
              • Again I am being enlightened
                • 4 applied topics focussing on the UK
                  • Distribution of retailing
                  • Distribution of schools
                  • Houseprice fluctuations
                  • Management of immigration
          • Masters dissertation mentoring (unofficial)
            • Traffic and transportation planning in Lagos, Nigeria
              • Olugboyega Onimole (Gboyega)
            • Road accidents and road safety in Riyadh, Saudi Arabia
              • Nawaf Alotaibi
          • Applying geomorphometrics to assess plant habitat connectivity
            • Alice Milner
            • Mediterranean case study with a focus on two field sites in Greece
          • I wonder about giving lectures and developing course components based on the topics of my research interest
            • GEOG5060 Geomorphometrics
              • Perhaps too long since I was involved in this...
        • Main funded research
          • GENESIS
            • http://www.geog.leeds.ac.uk/people/a.turner/projects/GENESIS/
            • Collaboration with University College London
            • 80% of my research time
            • The development of two social simulation models of people movements
              • Daily time step
                • "Demographic Model"
                • Birth, Death, Migration
                • Currently working on the migration model
                • Next step is to generate some results for Leeds and consider comparison with annual time step models developed by others
              • Second time step
                • "Traffic Model"
                • Initial focus on commuting from work to home and back
                • Currently working on scaling up to city size
                • Next step is to incorporate journeys to schools
            • Developing a generic Social Simulation Application Programming Interface (API)
            • Focus on application to contemporary UK
          • NeISS
            • http://www.geog.leeds.ac.uk/people/a.turner/projects/e-ISS/
            • 20% of my research time
            • Making social simulation models easy for others to run and develop
              • Web and workflow based user interfaces to run models and plug data and compute resources
          • Ordnance Survey Building geometry work
            • http://www.geog.leeds.ac.uk/people/a.turner/projects/UKBuildingGeometry/
            • Jianhui Jin
            • Involves geomorphometrics and pattern recognition using digital neural networks
        • Other on-going research collaborations
          • SIM-UK
            • http://www.geog.leeds.ac.uk/people/a.turner/projects/SIM-UK/
            • The development, integration and use of geographical simulation models of the UK
            • Aiming to develop and submit funding proposals whilst getting on with it...
          • Unofficially I am working on a biography of Stan Openshaw
            • I have Stan's permission, but have really only just started
        • Call for collaboration
          • The key to progress is collaboration
          • We are not short of topics to study in geography!
          • If you want to collaborate on any project I am working with, please contact me
          • Update your web pages so they link to details about what you are doing
        • Thanks and Acknowledgements
          • The university of Leeds
            • Centre for Computational Geography
            • School of Mathematics
            • School of Geography
            • School of Computing
          • The eResearch community
          • Other organisations that have provided funding and services to resource my research
            • JISC
              • http://www.jisc.ac.uk
            • ESRC
              • http://www.esrc.ac.uk
            • Ordnance Survey
              • http://www.ordnancesurvey.co.uk
            • EC
              • http://ec.europa.eu
          • The open source community that helps to provide the software and data that fuels my research
          • Government and digital curators that collect and make other data available for research
        • Delivery
          • I presented to:
            • Chris Thompson
              • http://www.geog.leeds.ac.uk/people/c.thompson
            • Paul Norman
              • http://www.geog.leeds.ac.uk/people/p.norman
            • John Stillwell
              • http://www.geog.leeds.ac.uk/people/j.stillwell
            • Andy Evans
              • http://www.geog.leeds.ac.uk/people/a.evans
            • Adam Dennett
              • http://www.geog.leeds.ac.uk/people/a.dennett
            • Holly Schulman
              • http://www.geog.leeds.ac.uk/people/h.shulman
            • I think I managed to get across my opinion that more practice of open collaborative ways of working would be good.
            • I was pleased with the open consideration and interaction
              • There was a lot of interesting discussion
              • None of it was captured digitally at the time though...
            • A key concern raised was that developing web pages and collaborating takes a lot of time
            • It was argued that
              • Time would be better spent writing "considered" peer reviewed journal articles
                • In a way I was challenging the notion that these are still the best way to communicate in an impactful way
      • Teaching
        • GEOG2300/GEOG3600 Meeting with Paul Waley to go through marking of dissertation research proposal documents
  • 2010-04-30

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  • Copyright: Andy Turner, University of Leeds