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| Packages that use GENESIS_Mortality | |
|---|---|
| uk.ac.leeds.ccg.andyt.projects.genesis.process | |
| uk.ac.leeds.ccg.andyt.projects.genesis.society.demography | |
| uk.ac.leeds.ccg.andyt.projects.genesis.utilities | |
| Uses of GENESIS_Mortality in uk.ac.leeds.ccg.andyt.projects.genesis.process |
|---|
| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.process that return GENESIS_Mortality | |
|---|---|
GENESIS_Mortality |
Abstract_GENESIS_DemographicModel.get_Mortality(java.lang.String regionID,
java.lang.String subregionID)
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| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.process with parameters of type GENESIS_Mortality | |
|---|---|
java.math.BigDecimal |
Compare_GENESIS_DemographicModel.compareMortality(GENESIS_Mortality inputMortality_Mortality,
GENESIS_Mortality outputMortality_Mortality)
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boolean |
GENESIS_DemographicModel.simulateDeath(GENESIS_Mortality mortality,
GENESIS_Female a_Female,
java.lang.Long a_Female_ID,
GENESIS_FemaleCollection a_FemaleCollection,
java.lang.Long a_Collection_ID,
GENESIS_AgeBound ageBound,
GENESIS_Population subregionPopulation,
GENESIS_Population regionTotalPopulation,
java.util.TreeSet<java.lang.Long> pregnantFemaleIDs,
java.util.TreeSet<java.lang.Long> nearlyDuePregnantFemaleIDs,
java.util.TreeSet<java.lang.Long> notPregnantFemaleIDs)
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boolean |
GENESIS_DemographicModel.simulateDeath(GENESIS_Mortality mortality,
GENESIS_Male a_Male,
java.lang.Long a_Male_ID,
GENESIS_MaleCollection a_MaleCollection,
java.lang.Long a_Collection_ID,
GENESIS_AgeBound ageBound,
GENESIS_Population subregionPopulation,
GENESIS_Population regionTotalPopulation)
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| Uses of GENESIS_Mortality in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography |
|---|
| Fields in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography declared as GENESIS_Mortality | |
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GENESIS_Mortality |
GENESIS_MortalityAndFertilityEstimator._InitialEstimateOfMortality
Initial Mortality Estimate |
GENESIS_Mortality |
GENESIS_Fertility._Mortality
|
| Fields in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography with type parameters of type GENESIS_Mortality | |
|---|---|
java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Mortality>> |
GENESIS_Demographics._Mortality
For storing region mortality probabilities. |
| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography that return GENESIS_Mortality | |
|---|---|
static GENESIS_Mortality |
GENESIS_MortalityAndFertilityEstimator.getInitialEstimateOfMortality(GENESIS_Population initialPop,
GENESIS_Population deathPop,
GENESIS_Environment theGENESIS_Environment,
int decimalPlaces,
java.math.RoundingMode roundingMode)
|
| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography that return types with arguments of type GENESIS_Mortality | |
|---|---|
static java.util.TreeMap<java.lang.String,GENESIS_Mortality> |
GENESIS_Demographics.getInitialMortalityRate(GENESIS_Environment a_GENESIS_Environment,
java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Population>> singleYearOfAgePopulation,
java.util.TreeMap<java.lang.String,GENESIS_Population> inputDeathCount,
int decimalPlaces,
java.math.RoundingMode roundingMode)
|
| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography with parameters of type GENESIS_Mortality | |
|---|---|
static java.lang.Object[] |
GENESIS_MortalityAndFertilityEstimator.getEstimateRates(GENESIS_Population startYearPopulation,
GENESIS_Mortality initialEstimateOfMortality,
GENESIS_Fertility initialEstimateOfFertility,
GENESIS_Population birthPopulation,
GENESIS_Population deathPopulation,
int decimalPlacePrecision,
java.math.RoundingMode roundingMode)
|
static java.lang.Object[] |
GENESIS_Demographics.getTheoreticalEndYearPopulationsAndFertility(GENESIS_Population population,
GENESIS_Mortality mortality,
GENESIS_Fertility fertility,
int decimalPlacePrecisionForCalculations)
Applies annual mortality rates to start year populations to create end year population that have died and survived. |
static java.lang.Object[] |
GENESIS_Demographics.getTheoreticalFertilityAndNewBornPopulation(java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleStartYearPopulation,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleTheoreticalEndYearAgedPopulation,
GENESIS_Mortality mortality,
GENESIS_Fertility fertility,
int decimalPlacePrecisionForCalculations)
|
static java.lang.Object[] |
GENESIS_Demographics.getTheoreticallySurvivedAndDiedPopulation(GENESIS_Population population,
GENESIS_Mortality mortality)
Applies annual mortality rates to start year populations to created map0Value end year population that have died and survived. |
java.util.HashSet<java.util.concurrent.Future> |
GENESIS_Demographics.output(java.lang.String regionID,
java.io.File demographicsDirectory_File,
int dataWidthForScatterAndRegressionPlots,
int dataHeightForScatterAndRegressionPlots,
int dataWidthForAllAgesPopulationDisplays,
int dataHeightForAllAgesPopulationDisplays,
int dataWidthForFertileAgesPopulationDisplays,
int dataHeightForFertileAgesPopulationDisplays,
int decimalPlacePrecisionForCalculations,
int decimalPlacePrecisionForDisplay,
java.math.RoundingMode roundingMode,
GENESIS_Population startYearPopulation,
GENESIS_Population endYearPopulation,
GENESIS_Mortality startYear_Demographics_Mortality,
GENESIS_Fertility startYear_Demographics_Fertility,
GENESIS_Mortality endYear_Demographics_Mortality,
GENESIS_Fertility endYear_Demographics_Fertility,
java.lang.Long minAgeYearsForAllAgesPopulationDisplays,
java.lang.Long maxAgeYearsForAllAgesPopulationDisplays,
java.lang.Long minAgeYearsForFertilityAgesPopulationDisplays,
java.lang.Long maxAgeYearsForFertilityAgesPopulationDisplays,
GENESIS_Population populationAliveDaysThisYear,
GENESIS_Population populationDeathsThisYear,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfBirths_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfLabours_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfEarlyPregnancyLoss_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfClinicalMiscarriage_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfDaysInEarlyPregnancy_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfDaysInLatePregnancy_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfTwins_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfTriplets_TreeMap,
java.util.TreeMap<GENESIS_AgeBound,java.math.BigDecimal> femaleAgeInYearsCountOfPregnancies_TreeMap)
|
protected void |
GENESIS_Demographics.outputMortality(java.lang.String regionID,
GENESIS_Mortality mortality,
int dataWidthForAgeGenderPlots,
int dataHeightForAgeGenderPlots,
int dataWidthForScatterAndRegressionPlots,
int dataHeightForScatterAndRegressionPlots,
java.io.File demographicsDirectory_File,
GENESIS_Population populationDaysAliveInTimePeriod,
GENESIS_Population populationDeathsInTimePeriod,
long minAgeYearsForAllAgesPopulationDisplays,
long maxAgeYearsForAllAgesPopulationDisplays,
int decimalPlacePrecisionForCalculations,
int decimalPlacePrecisionForDisplay,
java.math.RoundingMode a_RoundingMode)
Calculates and exports simulated mortality rates for males and females and produces a comparison plot for these plotting the simulated (observed) rates against the input mortality rates. |
void |
GENESIS_Miscarriage.processCSVtoXML(java.io.File miscarriageRate_File,
GENESIS_Mortality mortality)
|
java.lang.Object[] |
GENESIS_MortalityAndFertilityEstimator.run(int year,
java.lang.String aLADCode,
java.math.BigDecimal twinProbability,
java.math.BigDecimal tripletProbability,
GENESIS_Population initialPop,
GENESIS_Mortality initialEstimateOfMortality,
GENESIS_Fertility initialEstimateOfFertility,
GENESIS_Population birthPop,
GENESIS_Population deathPop,
int decimalPlaces,
java.math.RoundingMode roundingMode)
|
| Constructors in uk.ac.leeds.ccg.andyt.projects.genesis.society.demography with parameters of type GENESIS_Mortality | |
|---|---|
GENESIS_Fertility(GENESIS_Environment a_GENESIS_Environment,
GENESIS_Mortality a_Mortality,
GENESIS_Miscarriage a_Miscarriage,
java.io.File fertility_File)
If the fertility file is a csv file then it is assumed the fertility are in terms of live births. |
|
GENESIS_Mortality(GENESIS_Environment a_GENESIS_Environment,
GENESIS_Mortality a_Mortality)
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|
GENESIS_Mortality(GENESIS_Mortality a_Mortality)
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GENESIS_MortalityAndFertilityEstimator(GENESIS_Environment _GENESIS_Environment,
GENESIS_Population _ObservedAnnualDeaths,
GENESIS_Population _ObservedAnnualBirthsByAgeOfMother,
GENESIS_Population _StartYearPopulation,
GENESIS_Mortality _InitialEstimateOfMortality,
GENESIS_Fertility _InitialEstimateOfFertility)
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|
| Uses of GENESIS_Mortality in uk.ac.leeds.ccg.andyt.projects.genesis.utilities |
|---|
| Methods in uk.ac.leeds.ccg.andyt.projects.genesis.utilities that return types with arguments of type GENESIS_Mortality | |
|---|---|
static java.util.TreeMap<java.lang.String,GENESIS_Mortality> |
GENESIS_Collections.deepCopyTo_TreeMap_String_Mortality(java.util.TreeMap<java.lang.String,GENESIS_Mortality> map)
|
static java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Mortality>> |
GENESIS_Collections.deepCopyTo_TreeMap_String_TreeMap_String_Mortality(java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Mortality>> map)
|
| Method parameters in uk.ac.leeds.ccg.andyt.projects.genesis.utilities with type arguments of type GENESIS_Mortality | |
|---|---|
static java.util.TreeMap<java.lang.String,GENESIS_Mortality> |
GENESIS_Collections.deepCopyTo_TreeMap_String_Mortality(java.util.TreeMap<java.lang.String,GENESIS_Mortality> map)
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static java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Mortality>> |
GENESIS_Collections.deepCopyTo_TreeMap_String_TreeMap_String_Mortality(java.util.TreeMap<java.lang.String,java.util.TreeMap<java.lang.String,GENESIS_Mortality>> map)
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