[ngs0093@ngs MoSeS]$ module avail ---------------------------------------------- /usr/local/Cluster-Apps/environment-modules-3.1.6/modulefiles ----------------------------------------------- dot module-cvs module-info modules null use.own ---------------------------------------------------------------- /usr/local/NGS/modulefiles ---------------------------------------------------------------- 32-bit gnu-compilers/wrapper mpig/1.0.6-200710190227/mpicc64pthr(default) 64-bit gotoblas/1.17 mx/default R/2.6.0 gromacs/3.3.1 namd/2.6 agentx/0.3.7 hdf5/1.6.6 netcdf/3.6.2 amber/9 i2g-mpi-start/0.0.58 oracle-instant-client/11_1 ant/1.7.0 intel-compilers/10.0 pbs/8.0 bioperl/1.4 intel-compilers/9.1 perldl/2.4.3 charm/5.9 intel-mkl/9.1 portland-compilers/7.0 curl/7.15.5 java/1.4.2_15 scalapack/1.8.0 curl/7.16.4 java/1.5.0_12 siesta/2.0.1 fftw/2 java/1.6.0_02 srb/3.4.2 fftw/2.1.5 lammps/22Jun07 srb/3.4.2-r3 fftw/3 mpi/mpich-mx-1.2.7..4 tcl/8.3.5 fftw/3.1.2 mpiblacs/1.1 tfbs/0.5.0 flexlm mpig/1.0.6-200710190227/gcc64dbgpthr globus/4.0.3 mpig/1.0.6-200710190227/mpicc64dbgpthr ---------------------------------------------------------- /usr/local/Cluster-Config/modulefiles ----------------------------------------------------------- 3.1.6 cluster-tools/2.0.5 installer-tools/2.0.3 modules [ngs0093@ngs MoSeS]$ module add mpi mpi/mpich-mx-1.2.7..4(7):ERROR:151: Module 'mpi/mpich-mx-1.2.7..4' depends on one of the module(s) '32-bit 64-bit ' mpi/mpich-mx-1.2.7..4(7):ERROR:102: Tcl command execution failed: prereq 32-bit 64-bit [ngs0093@ngs MoSeS]$ more launch #!/bin/bash source /etc/bashrc #module add 64-bit gnu-compilers mpi java #module add 64-bit gnu-compilers mpi java/1.4.2_15 module add 64-bit gnu-compilers mpi java/1.5.0_12 export MPJ_HOME=$HOME/mpj export PATH=$PATH:$MPJ_HOME/bin java -jar MoSeS.jar `~/mpj/hello/makeconf` mpj.conf niodev [ngs0093@ngs MoSeS]$ module add 64-bit [ngs0093@ngs MoSeS]$ module add mpi mpi/mpich-mx-1.2.7..4(8):ERROR:151: Module 'mpi/mpich-mx-1.2.7..4' depends on one of the module(s) 'intel-compilers/9.1 intel-compilers/10.0 portland-compil ers/7.0 gnu-compilers/wrapper ' mpi/mpich-mx-1.2.7..4(8):ERROR:102: Tcl command execution failed: prereq intel-compilers portland-compilers gnu-compilers [ngs0093@ngs MoSeS]$ module add 64-bit mpi mpi/mpich-mx-1.2.7..4(8):ERROR:151: Module 'mpi/mpich-mx-1.2.7..4' depends on one of the module(s) 'intel-compilers/9.1 intel-compilers/10.0 portland-compil ers/7.0 gnu-compilers/wrapper ' mpi/mpich-mx-1.2.7..4(8):ERROR:102: Tcl command execution failed: prereq intel-compilers portland-compilers gnu-compilers [ngs0093@ngs MoSeS]$ module add 64-bit gnu-compilers mpi [ngs0093@ngs MoSeS]$ which mpi /usr/bin/which: no mpi in (/usr/local/NGS/mpich-mx-1.2.7..4/gnu-64/bin:/usr/local/NGS/gnu-compiler-wrappers/bin64:/usr/local/Cluster-Apps/environment-module s-3.1.6//bin:/usr/kerberos/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/NGS/vdt-1.6.1/globus/bin:/usr/X11R6/bin:/usr/local/NGS/pbs-8.0/bin:/usr/local/NGS/vd t-1.6.1/globus/sbin:/home/ngs0093/bin:/usr/local/NGS/mx/bin) [ngs0093@ngs MoSeS]$ mx mx_bandwidth mx_dmabench mx_endpoint_info mx_info mx_log_dump mx_piobench mxtar mx_counters mx_dump mx_hostname mx_intr_coal mx_logging mx_reg [ngs0093@ngs MoSeS]$ which mx /usr/bin/which: no mx in (/usr/local/NGS/mpich-mx-1.2.7..4/gnu-64/bin:/usr/local/NGS/gnu-compiler-wrappers/bin64:/usr/local/Cluster-Apps/environment-modules -3.1.6//bin:/usr/kerberos/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/NGS/vdt-1.6.1/globus/bin:/usr/X11R6/bin:/usr/local/NGS/pbs-8.0/bin:/usr/local/NGS/vdt -1.6.1/globus/sbin:/home/ngs0093/bin:/usr/local/NGS/mx/bin) [ngs0093@ngs MoSeS]$ which mx_info /usr/local/NGS/mx/bin/mx_info [ngs0093@ngs MoSeS]$ ls -al /usr/local/NGS/mx lrwxrwxrwx 1 root root 10 Jul 26 2007 /usr/local/NGS/mx -> ./mx-1.2.1